GenoLeWM-FX Borzoi score cache report¶
Generated by tools.research.fx_borzoi_cache at 2026-06-11T12:30:00Z.
Parent epic: #266. Cache gate: #269.
The Borzoi rescue overlap audit is an alignment and feasibility artifact only. It is not a model-quality result, clinical result, deployment-readiness result, broad VEP superiority claim, broad Carbon comparison, useful-planning claim, ground-truth biology claim, or exact fipip overlap claim unless the exact fipip table join is actually run.
Reproduce¶
uv run python -m tools.research.fx_borzoi_cache \
--source-manifest configs/fx/borzoi_rescue_sources.json \
--overlap-report docs/research/fx-borzoi-overlap-report.json \
--output-cache docs/research/fx-borzoi-score-cache.parquet \
--output-manifest docs/research/fx-borzoi-cache-manifest.json \
--output-md docs/research/fx-borzoi-cache-report.md
Cache Artifact¶
| Artifact | Rows | SHA-256 | Size |
|---|---|---|---|
docs/research/fx-borzoi-score-cache.parquet |
11400 | sha256:74695a87dfd0045e6d3ad161167f765497dbb00d99b396ab9490c7d8ade7b76f |
533055 |
Row Summary¶
| Check | Value |
|---|---|
| Total rows | 11400 |
| Train rows | 8010 |
| Holdout rows | 3390 |
| Positive labels | 1140 |
| Negative labels | 10260 |
| Excluded rows | 0 |
| Unmatched rows | 0 |
| Duplicate variant keys | 0 |
The cache stores TraitGym-native row-aligned Borzoi scores as teacher-derived targets. It distinguishes that path from the optional fipip exact-join lane with fipip_exact_join_status=not_run_full_table_not_staged.